Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800597.1_cds_XP_016470620.1_6252
CDS Infomation

[gene=LOC107792884] [db_xref=GeneID:107792884] [protein=protein SDE2 homolog] [protein_id=XP_016470620.1] [location=join(21436..22103,23229..23802,26264..26410)] [gbkey=CDS]
Sequence

ATGGAGATGAAGGAAGGGTCTGTAATTCATCAAGTCCTCGTTAAACTTCTCGATGGGAAG
CACAAAACCCTAAATTTCAGTACCCCATCCATCTCGACCCTAACCCTAAAGCAGAAAATC
CAAGCCCTAACTTCAATCCCTTGTCACCTTCAGCTCCTGCTCCTTTCCAATTCATTCTAC
CCCCTACATGACGACCGCCAAACTCTAAATCTCTTTAACGGGTCTAATTTTCCAGTGGTG
GTGAATTTGTTGGTGCGCCTGAGGGGAGGTAAAGGAGGATTCGGGTCATTGCTGAGAGGA
GCGGCGACGAAGGCAGGGCAGAAGAAGACGAATAATTTCGACGCGTGCAGGGACATGAGT
GGACGAAGGCTAAGGCATGTGAATGCGGAGAAGAGGCTGGAAGAGTGGAGGGCTGAAGCG
GAGGAGAGGAAGTTGGAGAAGATGGCGGAGGATTTCCTTAAGAAAAATGCCAAGAAAGCA
GCGAAAAAGGGTAATAAGAGTGGAGATAGTAACACGGATAAGTATGTGCAGAAGTATAGG
GAGGATTCTGCTAAGTGTATGGAGGAAGTAGAGAGGTCTGTTAGGGAATCGCTTAAGGGG
TTTGTTTCATCTAAAAGGAAAGGTGCTGCTGAGCTCAATGAATCTGATCCCAAGAAGCTC
AAGATATTGTTGGGTAAGAGGATAATGGGCGACAGTGATAGCGAGGATCTAGATGATGAT
GACAGTGACAAAGACGAGGAAGAGAATGACAAATCCATTGTCATCGATAATGAGAATAAT
TCAGACTACAATGGAGAAGCAGAGGGAAGTTTGGATTCTGTGATTGGCAGGAAAGTTGAT
GGTGTTGCATCTGAGAGCGGCTCCGAGGAAGAAAAGGATACTCCTCTGAAGAATTCTGAA
TCTGGTAAAGATGTCAGTGTAGTTTCAGTTCAGCATGAAGGTGAAAGTCCGTCCTCACTC
ACTCCGGACAATCAAGAAAGACCTGGACAGAATTGTGTTGCCTCTATTGTTGGCACTGAT
ATTGCATCTGCAACTGAAAGTATTCAAACAGAAAAGGAAGTTTCTGGTAGTTCTGAGCCA
ATTGTTGTGGAAGCTAGCTCTGGTGAGAAAGAAAATGATGTTGCTGAAGCCAGCGATAGT
TTAAGCCCTAAACCAGTTCCTCTGGAAGATGCAACATCAAAGGATTCAGACTTGAAAAAG
CCTTTCAATTTTGAGGAATTTAGTTCAGCAGCAGAACTGGAGGCCGTCGGTATGGAGAGG
TTAAAATCAGAACTTCAAGTGCGTGGGTTGAAGTGTGGGGGCACTCTGCAAGAACGTGCA
GCCAGGCTTTTCCTACTCAAAACCACACCTACGGAGATGCTTCCAAAGAAGTTGCTCGCT
AAGAAATAA

Peptide Sequence

PEP ID

XP_016470620.1
PEP Infomation

PREDICTED: protein SDE2 homolog [Nicotiana tabacum]
Sequence

MEMKEGSVIHQVLVKLLDGKHKTLNFSTPSISTLTLKQKIQALTSIPCHLQLLLLSNSFY
PLHDDRQTLNLFNGSNFPVVVNLLVRLRGGKGGFGSLLRGAATKAGQKKTNNFDACRDMS
GRRLRHVNAEKRLEEWRAEAEERKLEKMAEDFLKKNAKKAAKKGNKSGDSNTDKYVQKYR
EDSAKCMEEVERSVRESLKGFVSSKRKGAAELNESDPKKLKILLGKRIMGDSDSEDLDDD
DSDKDEEENDKSIVIDNENNSDYNGEAEGSLDSVIGRKVDGVASESGSEEEKDTPLKNSE
SGKDVSVVSVQHEGESPSSLTPDNQERPGQNCVASIVGTDIASATESIQTEKEVSGSSEP
IVVEASSGEKENDVAEASDSLSPKPVPLEDATSKDSDLKKPFNFEEFSSAAELEAVGMER
LKSELQVRGLKCGGTLQERAARLFLLKTTPTEMLPKKLLAKK

Transcript Sequence

Gene sequence data has not been registered.